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Research Spending & Results

Award Detail

Awardee:BOARD OF REGENTS OF THE UNIVERSITY OF NEBRASKA
Doing Business As Name:University of Nebraska
PD/PI:
  • F F Choobineh
  • (402) 472-8946
  • fchoobineh@nebraska.edu
Award Date:09/29/2010
Estimated Total Award Amount: $ 20,000,000
Funds Obligated to Date: $ 22,000,000
  • FY 2014=$4,000,000
  • FY 2010=$8,000,000
  • FY 2015=$2,000,000
  • FY 2013=$4,000,000
  • FY 2012=$4,000,000
Start Date:10/01/2010
End Date:09/30/2016
Transaction Type: Cooperative Agreements
Agency:NSF
Awarding Agency Code:4900
Funding Agency Code:4900
CFDA Number:47.083
Primary Program Source:040100 NSF RESEARCH & RELATED ACTIVIT
Award Title or Description:Nebraska 2010-15 RII Project: Nanohybrid Materials & Algal Biology
Federal Award ID Number:1004094
DUNS ID:068662618
Parent DUNS ID:068662618
Program:EPSCoR Research Infrastructure
Program Officer:
  • Timothy VanReken
  • (703) 292-7378
  • tvanreke@nsf.gov

Awardee Location

Street:3835 Holdrege Street
City:Lincoln
State:NE
ZIP:68503-1435
County:Lincoln
Country:US
Awardee Cong. District:01

Primary Place of Performance

Organization Name:University of Nebraska
Street:3835 Holdrege Street
City:Lincoln
State:NE
ZIP:68503-1435
County:Lincoln
Country:US
Cong. District:01

Abstract at Time of Award

Proposal Number: EPS-1004094 Proposal Title: Nebraska 2010-15 RII Project: Nanohybrid Materials & Algal Biology Institution: University of Nebraska This project invests in two independent research areas of local and national importance by capitalizing on Nebraska's core strengths in nanomaterials and algal biology. It proposes to establish two interdisciplinary research centers of excellence: the Center for Nanohybrid Functional Materials and the Nebraska Center for Algal Biology and Biotechnology. These centers are expected to assemble the expertise of 29 faculty members from seven disciplines to collaboratively address important fundamental science questions that also align with state and NSF priorities in nanoscience and energy. The project?s participating institutions are: the University of Nebraska-Lincoln, Creighton University, Doane College, University of Nebraska at Kearney, University of Nebraska Medical Center, Little Priest Tribal College, and Nebraska Indian Community College. Intellectual Merit The Nanohybrid Center proposes to pursue new sensing principles for nanohybrid materials that combine molecular scale recognition elements (such as DNA, dyes, or aptamers) with scaffolds composed of 3D ordered nanostructures. The new hybrid materials are anticipated to have unique chemical and physical properties. These novel features may offer yet unglimpsed potential for applications in health diagnostics, environmental monitoring, and domestic security. Algae have tremendous potential for providing large quantities of lipid-based biofuels on land unusable for production of food crops. The commercial use of algae for biofuels has yet to be realized because of the limited knowledge of the genetic and biochemical factors that regulate the growth of algae and their ability to accumulate lipids. The Algal Center would address this barrier by conducting basic research on the biology and metabolism of algae. Algae available today exhibit only a small portion of the genetic potential that lies within their genomes, and knowledge of fundamental algal biology is woefully limited. Broader Impacts By providing collaborative opportunities for scientists, engineers, and private industry partners, this project proposes to dramatically advance the knowledge base in the areas of nanohybrid materials and algal biology and biotechnology. The proposed research in these fields holds great potential for the development of applications in health diagnostics, environmental monitoring, domestic security, and renewable and ecologically friendly energy production. The project would: 1) develop public-private collaborations through the University-Industry R&D Partnership Program, culminating in Small Business Innovation Research and Small Business Technology Transfer grants; 2) promote technology transfer through the Nebraska Engineering, Science, and Technology Internship Program; and 3) form project-focused relationships with local and national technology companies. This project also would develop a pipeline of future scientists across Nebraska and enhance participation of individuals from under-represented groups in the bioscience, engineering, and other STEM fields through the Underrepresented Opportunity Portfolio. Research findings would be disseminated through conferences, presentations, interactive Web sites, and NE EPSCoR outreach programs.

Publications Produced as a Result of this Research

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S. Knight, S. Schöche, V. Darakchieva, P. Kühne, J.-F. Carlin, N. Grandjean, C. M. Herzinger, M. Schubert, and T. Hofmann "Selected for Spotlight on Optics, Cavity-enhanced optical Hall effect in two-dimensional free charge carrier gases detected at terahertz frequencies" Optics Letters, v., 2015, p.. doi:https://doi.org/10.1364/OL.40.002688 

Vo, Timothy H and Shekhirev, Mikhail and Lipatov, Alexey and Korlacki, Rafal A and Sinitskii, Alexander "Bulk properties of solution-synthesized chevron-like graphene nanoribbons" Faraday discussions, v., 2014, p..

D. Schmidt, E. Schubert, and M. Schubert "Optical Properties of Cobalt Slanted Columnar Thin Films Passivated by Atomic Layer Deposition" Appl. Phys. Lett., v.100, 2012, p.011912.

Brant Burbank, Michael Slater, Alyssa Kava, James Doyle, William A. McHale, Mark A. Latta, Stephen M. Gross "Ion release, fluoride charge, and adhesion of orthodontic cement containing microcapsules" Journal of Dentistry, 2016, 45 32., v., 2016, p..

Hirtz, Michael, Marcus Lyon, Wenqian Feng, Andrea E. Holmes, Harald Fuchs, and Pavel A. Levkin "Porous polymer coatings as substrates for the formation of high-fidelity micropatterns by quill-like pens" Beilstein J. Nanotechnol., v.4, 2013, p.377-384.

Wulfmeyer, T., C. Polzer, G. Hiepler, K. Hamacher, R. Shoeman, D.D. Dunigan, J.L. Van Etten, M. Lolicato, A. Moroni, G. Thiel, and T. Meckel "Structural organization of DNA in chlorella viruses" PLoS One, v.7, 2012, p.e30133.

Yolken, R.H., Jones-Brando, L., Dunigan, D.D., Kannan, G., Dickerson, F.B., Severance, E.G., Sabunciyan, S., Talbot, C.C., Prandovszky, E., Gurnon, J.R., Agarkova, I.V., Leister, F., Gressitt, K.L., Chen, O., Deuber, B., Ma, F., Pletnikov, M.V., Van Etten "Chlorovirus ATCV-1 is part of the human oropharyngeal virome and is associated with changes in cognitive functions in humans and mice." Proc. Natl. Acad. Sci. USA, v.111, 2014, p.16106.

S. Schoeche, J. Shi, A. Boosalis, P. K�¼hne, C. M. Herzinger, J.A. Woollam, W.J. Schaff, L.F. Eastman, M. Schubert, and T. Hofmann "Terahertz optical-Hall effect characterization of two-dimensional electron gas properties in AlGaN/GaN high electron mobility transistor structures" Appl. Phys. Lett., v.98, 2011, p..

D. Liang, D. Sekora, C. Rice, E. Schubert, and M. Schubert "Optical anisotropy of porous polymer film with inverse slanted nanocolumnar structure revealed via generalized spectroscopic ellipsometry" Appl. Phys. Lett., v., 2015, p.. doi:http://dx.doi.org/10.1063/1.4929367 

M. Schubert, R. Korlacki, S. Knight, T. Hofmann, S. Schöche, V. Darakchieva, E. Janzén, B. Monemar, D. Gogova, Q.-T. Thieu, R. Togashi, H. Murakami, Y. Kumagai, K. Goto, A. Kuramata, S. Yamakoshi, M. Higashiwaki "Anisotropy, phonon modes, and free charge carrier parameters in monoclinic ?-gallium oxide single crystals" Phys. Rev. B 93, 125209, v., 2016, p..

Lyubchenko, Y. L. "Nanoimaging for Molecular Pharmaceutics of Alzheimer?s and other Neurodegenerative disorders" J Mol Pharm Org Process Res, v.1, 2013, p.1. doi:10.4172/jmpopr.1000e107 

Voshall, Adam and Kim, Eun-Jeong and Ma, Xinrong and Moriyama, Etsuko N and Cerutti, Heriberto "Identification of AGO3-Associated miRNAs and Computational Prediction of Their Targets in the Green Alga Chlamydomonas reinhardtii" Genetics, v.200, 2015, p.105-121.

Salamifar, S Ehsan and Lee, Stephen and Lai, Rebecca Y "Electrochemical hydrogen peroxide sensors fabricated using cytochrome c immobilized on macroelectrodes and ultramicroelectrodes" Colloids and Surfaces B: Biointerfaces, v.123, 2014, p.866-869.

Ma X., Kim E.-J., Kook I., Ma F., Voshall A., Moriyama E. and Cerutti H. "Small RNA-Mediated Translation Repression Alters Ribosome Sensitivity to Inhibition by Cycloheximide in Chlamydomonas reinhardtii" Plant Cell, v.25, 2013, p.985-998.

Bihmidine, Saadia and Cao, Mingxia and Kang, Ming and Awada, Tala and Van Etten, James L and Dunigan, David D and Clemente, Tom E "Expression of Chlorovirus MT325 aquaglyceroporin (aqpv1) in tobacco and its role in mitigating drought stress" Planta, v.240, 2014, p.209-221.

Martin TM, Plautz SA and Pannier AK "Network analysis of endogenous gene expression profiles after polyethyleneimine-mediated DNA delivery" Journal of Gene Medicine, v.15, 2013, p.142.

Van Etten, J.L. "Les virus geants" Les virus geants, v.415, 2012, p.22-28.

Darakchieva, V., A. Boosalis, A. A. Zakharov, T. Hofmann, M. Schubert, T. E. Tiwald, T. Iakimov, R. Vasiliauskas, and R. Yakimova "Large-area microfocal spectroscopic ellipsometry mapping of thickness and electronic properties of epitaxial graphene on Si- and C-face of 3C-SiC (111)" App. Phys. Lett., v.102, 2013, p.213116.

Zhang, Q., Ianno, N. J., andHan, M. "Fiber-optic refractometer based on etched high-Q ?-phase-shifted fiber Bragg grating" Sensors, v.13, 2013, p.8827.

Van Etten, J.L. and Dunigan, DD "Chloroviruses: not your everyday plant virus" Trends in Plance Sciences, v.17, 2012, p.1.

Lovas, S., Zhang, Y., Yu, J. & Lyubchenko, Y. L. "Molecular mechanism of misfolding and aggregation of Abeta(13-23)" The Journal of Physical Chemistry, v.117, 2013, p.6175.

SIMANSHU, D.K, ZHAI, X., MUNCH, D., HOFIUS, D., MARKHAM, J.E., BIELAWSKI, J., BIELAWSKA, A., MALININA, L., MOLOTKOVSKY, J.G., MUNDY, J.W., PATEL, D.J., BROWN, R.E. "Arabidopsis Accelerated Cell Death 11, ACD11, Is a Ceramide-1-Phosphate Transfer Protein and Intermediary Regulator of Phytoceramide Levels" Cell Rep., v., 2014, p..

Knobbe, Amy R and Horken, Kempton M and Plucinak, Thomas M and Hakim, Eniko Balasssa and Cerutti, Heriberto and Weeks, Donald P "SUMOylation by a stress-specific SUMO E2 conjugase is essential for survival of Chlamydomonas reinhardtii under stress conditions" Plant Physiology, v., 2015, p.pp. 114.2.

Soukup, R.J, P. Prabukanthan, N.J. Ianno, A. Sarkatr, C. Kamler, and D.G. Sekora "Formation of Pyrite Thin films (FeS2) by themal sulfurization of d.c. magnetron sputtered Iron" J.Vac. Sci. Technol. A, v.29, 2011, p.011001.

Msanne J., Xu D., Konda A. R., Casas-Mollano J. A., Awada T., Cahoon E. B., Cerutti H. "Metabolic and gene expression changes triggered by nitrogen deprivation in the photoautotrophically grown microalgae Chlamydomonas reinhardtii and Coccomyxa sp. C-169." Phytochemistry, v.75, 2012, p.50.

D. Schmidt, C. Müller, T. Hofmann, O. Inganaes, H. Arwin, E. Schubert, and M. Schubert, "Optical properties of hybrid titanium chevron sculptured thin films coated with a semiconducting polymer" Thin Solid Films, v.519, 2011, p.2645.

Pflaster, Erin L and Schwabe, Michael J and Becker, Joyanne and Wilkinson, Melissa S and Parmer, Ashley and Clemente, Thomas E and Cahoon, Edgar B and Riekhof, Wayne R "A high-throughput fatty acid profiling screen reveals novel variations in fatty acid biosynthesis in Chlamydomonas reinhardtii and related algae" Eukaryotic cell, v.13, 2014, p.1431-1438.

Fisher T.; Dussault, P. H. "Regioselective Synthesis of tetralkynylarenes via Consecutive Dual Sonogashira Couplings of the bistriflate of 1,2-Dihydroxy-4,5-diodobenzene" Eur. J. Org. Chem., v., 2012, p.2831.

Lai, R. Y.; Walker, B.; Stormberg, K.; Zaitouna, A. J.; Yang, W. "Electrochemical Techniques for Characterization of Stem-loop Probe and Linear Probe-based DNA Sensors" Methods, v.64, 2013, p.267.

Li, T., B. Liu, M. H. Spalding, D. P. Weeks, and B. Yang. "High Efficiency TALEN-based Gene Editing for Disease Resistance in Crop Plants." Nature Biotechnology, v.30, 2012, p.390.

Jeanniard, Adrien; Dunigan, David D.; Gurnon, James R.; Agarkova, Irina V.; Kang, Ming; Vitek, Jason; Duncan, Garry; McClung, O. William; Larsen, Megan; Claverie, Jean-Michel; Van Etten, James L.; Blanc, Guillaume "Towards defining the chloroviruses: a genomic journey through a genus of large DNA viruses" BMC GENOMICS, v.14, 2013, p.158.

Milrot, E., Mutsafi, Y., Fridmann-Sirkis, Y., Shimoni, E., Rechav, K., Gurnon, J.R., Van Etten, J.L., Minsky, A. "Virus-host interactions: Insights from the replication cycle of the large Paramecium bursaria chlorella virus" Cellular Microbiol., v.18, 2016, p.3.

K. B. Rodenhausen, R. S. Davis, D. Sekora, D. Liang, A. Mock, R. Neupane, D. Schmidt, T. Hofmann, E. Schubert, and M. Schubert, "The retention of liquid by columnar nanostructured surfaces during quartz crystal microbalance measurements and the effects of adsorption thereon" J. Colloid Interf. Sci., v., 2015, p.. doi:http://dx.doi.org/10.1016/j.jcis.2015.05.038 

Quispe, C., Sonderman, O., Seng, A., Rasmussen, B., Webber, G., Mueller C., Dunigan, D.D., Van Etten, J.L. "Three-year survey of abundance, prevalence, and genetic diversity of Chlorovirus populations in a small urban lake." Arch. Virology, v., 2016, p.1839.

Okuom, M., M. Wilson, A. Jackson, and A. Holmes "Intermolecular Interactions between Eosin Y and Caffeine Using 1H-NMR Spectroscopy" International Journal of Spectroscopy, v.2013, 2013, p..

Cody Raml, Xiangnan He, Ming Han, Dennis R. Alexander, and Yongfeng Lu, "Raman spectroscopy based on a single-crystal sapphire fiber" Opt. Lett., v.36, 2011, p.1287.

Wase, Nishikant and Black, Paul N and Stanley, Bruce A and DiRusso, Concetta C "Integrated quantitative analysis of nitrogen stress response in Chlamydomonas reinhardtii using metabolite and protein profiling" Journal of proteome research, v.13, 2014, p.1373-1396.

C. Briley, D. Schmidt, T. Hofmann, E. Schubert, and M. Schubert "Anisotropic magneto-optical hysteresis of permalloy slanted columnar thin films determined by vector magneto-optical generalized ellipsometry" Appl. Phys. Lett., v., 2015, p.. doi:10.1063/1.4916669 

Kühne, P., A. Boosalis, C. M. Herzinger, L.O. Nyakiti, V.D. Wheeler, R.L. Myers-Ward, C.R. Eddy, Jr., D.K. Gaskill, M. Schubert, and T. Hofmann "Reflection-type optical-Hall effect measurement of Landau-level transitions in epitaxial graphene on silicon carbide - coupled phonon mode" Mat. Res. Soc. Symp. Proc., v.1505, 2013, p.w07.

K.B. Rodenhausen, and M. Schubert "Virtual separation approach to study porous ultra-thin films by combined spectroscopic ellipsometry and quartz crystal microbalance methods" Thin Solid Films, v.519, 2011, p.2772.

Xie, M.-Y. , Ben Sedrine, N., Schöche, S., Hofmann, T. , Schubert, M., Hong, L. , Monemar, B., Wang, X., Yoshikawa, A. , Wang , K., Araki, T., Nanishi, Y., and Darakchieva, V. "Effect of Mg doping on the structural and free-charge carrier properties of InN thin films" J. Appl. Phys, v., 2014, p..

Schöche, S and Hofmann, T and Darakchieva, Vanya and Wang, X and Yoshikawa, A and Wang, K and Araki, T and Nanishi, Y and Schubert, M "Free-charge carrier parameters of n-type, p-type and compensated InN: Mg determined by infrared spectroscopic ellipsometry" Thin Solid Films, v.571, 2014, p.384-388.

D. Schmidt, E. Schubert, and M. Schubert "Optical Properties of Cobalt Slanted Columnar Thin Films Passivated by Atomic Layer Deposition" Vir. J. Nan. Sci. & Tech., v.25, 2012, p.4.

Schöche, S., Hofmann, T., Darakchieva, V., Sedrine, N. Ben, Wang, X., Yoshikawa, A., and Schubert, M. "Infrared to vacuum-ultraviolet ellipsometry and optical Hall-effect study of free-charge carrier parameters in Mg-doped InN" J. Appl. Phys., v.113, 2013, p.013502.

Koenig, Meike and Kasputis, Tadas and Schmidt, Daniel and Rodenhausen, Keith B and Eichhorn, Klaus-Jochen and Pannier, Angela K and Schubert, Mathias and Stamm, Manfred and Uhlmann, Petra "Combined QCM-D/GE as a tool to characterize stimuli-responsive swelling of and protein adsorption on polymer brushes grafted onto 3D-nanostructures" Analytical and bioanalytical chemistry, v.406, 2014, p.7233-7242.

Kunkel, D. A. and Hooper, J. and Simpson, S. and Miller, D. P. and Routaboul, L. and Braunstein, P. and Doudin, B. and Beniwal, S. and Dowben, P. and Skomski, R. and Zurek, E. and Enders, A. "Self-assembly of strongly dipolar molecules on metal surfaces" Journal of Chemical Physics, v.142, 2015, p..

Kong, L., Rahman, T., Enders, A. Dowben, P. "Molecular adsorption on graphene" J. Phys: Condens. Matter, v., 2013, p..

Arrigoni, Cristina; Schroeder, Indra; Romani, Giulia; Van Etten, James L.; Thiel, Gerhard; Moroni, Anna "The voltage-sensing domain of a phosphatase gates the pore of a potassium channel" JOURNAL OF GENERAL PHYSIOLOGY, v.141, 2013, p.389-395.

Yu, Z. and Lai, R.Y. "The Effect of Signaling Probe Conformation on Sensor Performance of a Displacement-based Electrochemical DNA Sensor" Analytical Chemistry, v.85, 2013, p.3340-3346.

Kong, L. M. and Enders, A. and Rahman, T. S. and Dowben, P. A. "Molecular adsorption on graphene" Journal of Physics-Condensed Matter, v.26, 2014, p..

Wei, Z. and Yang, J. H. and Zhou, J. X. and Xu, F. and Zrinyi, M. and Dussault, P. H. and Osada, Y. and Chen, Y. M. "Self-healing gels based on constitutional dynamic chemistry and their potential applications" Chemical Society Reviews, v.43, 2014, p.8114-8131.

N. Ben Sedrine, A. Zukauskaite, J. Birch, J. Jensen, L. Hultman, S. Schoeche, M. Schubert, and V. Darakchieva "Infrared dielectric functions and optical phonons of wurtzite Y(x)Al(1-x)N (0 < = x < = 0.22)" J. Phys. D. Appl. Phys., v.48, 2015, p.. doi:http://dx.doi.org/10.1088/0022-3727/48/41/415102 

Martin, Timothy M and Plautz, Sarah A and Pannier, Angela K "Temporal endogenous gene expression profiles in response to polymer?mediated transfection and profile comparison to lipid?mediated transfection" The journal of gene medicine, v.17, 2015, p.33-53.

Rojas, G., S. Simpson, X. Chen, D.A. Kunkel, J. Nitz, J. Xiao, P.A. Dowben, E. Zurek, A. Enders "Surface state engineering of molecule-molecule interactions" Phys. Chem. Chem. Phys., v.14, 2012, p.4971.

Luttgeharm, Kyle D and Cahoon, Edgar B and Markham, Jonathan E "A mass spectrometry-based method for the assay of ceramide synthase substrate specificity" Analytical biochemistry, v.478, 2015, p.96-101.

C. Briley, D. Schmidt, T. Hofmann, E. Schubert, and M. Schubert "Anisotropic magneto-optical hysteresis of permalloy slanted columnar thin films determined by vector magneto-optical generalized ellipsometry" Appl. Phys. Lett. 106, 133104 (2015), v., 2015, p..

Kobayashi, Naoko and Noel, Eric A and Barnes, Austin and Rosenberg, Julian and DiRusso, Concetta and Black, Paul and Oyler, George A "Rapid detection and quantification of triacylglycerol by HPLC?ELSD in Chlamydomonas reinhardtii and Chlorella strains" Lipids, v.48, 2013, p.1035-1049.

Wilson, Peter M and Mbah, Gilbert N and Smith, Thomas G and Schmidt, Daniel and Lai, Rebecca Y and Hofmann, Tino and Sinitskii, Alexander "Three-dimensional periodic graphene nanostructures" Journal of Materials Chemistry C, v.2, 2014, p.1879-1886.

King, S., Soetan N., Silva M., Kramer L., Choquette K., Lahey C., Colon T., Becker J., Kurgan G., Marquez A., Gaffigan B., Cerutti H. and Blum P. "The Future of Natural Gas: A Millenial Perspective from NSF REU Scholars." Internatl. Innov. N. A., v.116, 2013, p.54.

Knight, S. and Schöche, S. and Darakchieva, V. and Kühne, P. and Carlin, J. F. and Grandjean, N. and Herzinger, C. M. and Schubert, M. and Hofmann, T. "Cavity-enhanced optical Hall effect in two-dimensional free charge carrier gases detected at terahertz frequencies" Optics Letters, v.40, 2015, p.2688-2691.

M. Zhou, F. L. Pasquale, P. A. Dowben, A. Boosalis, M. Schubert, V. Darakchieva, R. Yakimova, L. Kong, and J. A. Kelber "Direct graphene growth on Co3O4(111) by molecular beam epitaxy" J. Phys.: Condens. Matter, v.24, 2012, p.072201.

Luttgeharm, Kyle D and Kimberlin, Athen N and Cahoon, Rebecca E and Cerny, Ronald L and Napier, Johnathan A and Markham, Jonathan E and Cahoon, Edgar B "Sphingolipid metabolism is strikingly different between pollen and leaf in Arabidopsis as revealed by compositional and gene expression profiling" Phytochemistry, v., 2015, p..

Kasputis, T, Koenig, M., Schmidt, D., Sekora, D., Rodenhausen, K.B., Eichhorn, K.J., Uhlmann, P., Schubert, E., Pannier, A.K., Schubert, M., and Stamm, M. "Slanted columnar thin films prepared by glancing angle deposition functionalized with polyacrylic acid polymer brushes" The Journal of Physical Chemistry C, v.XX, 2013, p.1-10.

Smith, A., M. V. Wilson, M. Trauernicht, A. E. Holmes, Abby Jackson. "Improved image analysis of DETECHIP allows for increased specificity in drug discrimination" Journal of Forensic Research, v.3, 2012, p.1-4.

P. Wilson, A. Zobel, A. Lipatov, E. Schubert, T. Hofmann, and A. Sinitskii "Multilayer Graphitic Coatings for Thermal Stabilization of Metallic Nanostructures" ACS Appl. Mater. Interfaces, v., 2015, p.. doi:10.1021/am506777a 

Kment, S and Kmentova, H and Sarkar, A and Soukup, RJ and Ianno, NJ and Sekora, D and Olejnicek, J and Ksirova, P and Krysa, J and Remes, Z "Epoxy catalyzed sol?gel method for pinhole-free pyrite FeS 2 thin films" Journal of Alloys and Compounds, v.607, 2014, p.169-176.

T. Hofmann, D. Schmidt, A. Boosalis, P. Kuehne, R. Skomski, C.M. Herzinger, J.A. Woollam, M. Schubert, and E. Schubert "THz dielectric anisotropy of metal slanted columnar thin films" Applied Physics Letters, v., 2011, p..

Ting L, S Huang, WZ Jiang, D Wright, MH Spalding, DP Weeks, B Yang, "TAL nucleases (TALNs): hybrid proteins composed of TAL effectors and FokI DNA-cleavage domain." Nucleic Acids Research, v.39, 2011, p.359-72.

Sinitskii, Alexander and Erickson, Kristopher J and Lu, Wei and Gibb, Ashley L and Zhi, Chunyi and Bando, Yoshio and Golberg, Dmitri and Zettl, Alex and Tour, James M "High-Yield Synthesis of Boron Nitride Nanoribbons via Longitudinal Splitting of Boron Nitride Nanotubes by Potassium Vapor" ACS nano, v.8, 2014, p.9867-9873.

Alyssa Mock, Rafa? Korlacki, Chad Briley, Derek Sekora, Tino Hofmann, Peter Wilson, Alexander Sinitskii, Eva Schubert and Mathias Schubert "Anisotropy, band-to-band transitions, phonon modes, and oxidation properties of cobalt-oxide core-shell slanted columnar thin films" Appl. Phys. Lett., v., 2016, p.. doi:http://dx.doi.org/10.1063/1.4941399 

Zimmer BM, Howell ME, Wei Q, Ma L, Romsdahl T, Loughman EG, Markham JE, Seravalli J, Barycki JJ, Simpson MA. "Loss of exogenous androgen dependence by prostate tumor cells is associated with elevated glucuronidation potential." Horm Cancer., v., 2016, p.260.

Schmidt, D., Briley, C., Schubert, E., and Schubert, M., "Vector Magneto-Optical Generalized Ellipsometry for Sculptured Thin Films" Appl. Phys. Lett., v.102, 2013, p.123109.

Krasnoslobodtsev, A. V., Volkov, I. L., Asiago, J. M., Hindupur, J., Rochet, J. C. & Lyubchenko, Y. L. "Alpha-Synuclein Misfolding Assessed with Single Molecule AFM Force Spectroscopy: Effect of Pathogenic Mutations" Biochemistry, v.52, 2013, p.7377.

Luttgeharm KD, Kimberlin AN, Cahoon RE, Cerny RL, Napier JA, Markham JE, Cahoon EB "Sphingolipid metabolism is strikingly different between pollen and leaf in Arabidopsis as revealed by compositional and gene expression profiling" Phytochemistry, v., 2015, p.121.

Ahrens, E., B. Karlin, A. Teten, & P. Twigg "Measuring the effect of copper deprivation on lipid droplet formation in Chlamydomonas reinhardtii" Plant Biology, Annual meeting of the American Society of Plant Biologists, v., 2015, p..

E. Pfaunmiller, Annette C. Moser and David S. Hage "Biointeraction Analysis of Immobilized Antibodies and Related Agents by High-Performance Immunoaffinity Chromatography" Methods, v.56, 2012, p.130.

Rowe, J.M., Dunigan, D.D., Blanc, G., Gurnon, J.R., Xia, Y., Van Etten, J.L. "Evaluation of higher plant virus resistance genes in the green alga, Chlorella variabilis NC64A, during the early phase of infection with Paramecium bursaria chlorella virus" Virology, v.442, 2013, p.101.

Zaitouna, A. J.; Maben, A. J.; Lai, R. Y. "Incorporation of Extra Amino Acids in Peptide Recognition Probe to Improve Specificity and Selectivity of an Electrochemical Peptide-based Sensor." Anal. Chim. Acta, 2015, 886, 157-164, v., 2015, p..

Martin, Timothy M. and Wysocki, Beata J. and Beyersdorf, Jared P. and Wysocki, Tadeusz A. and Pannier, Angela K. "Integrating mitosis, toxicity, and transgene expression in a telecommunications packet-switched network model of lipoplex-mediated gene delivery" Biotechnology and Bioengineering, v.111, 2014, p.1659-1671.

Lipatov, A., Varezhnikov, A., Augustin, M., Bruns, M., Sommer, M., Sysoev, V., Kolmakov, A., and Sinitskii, A. "Intrinsic device-to-device variation in graphene field-effect transistors on a Si/SiO2 substrate as a platform for discriminative gas sensing." Applied Physics Letters, v.104, 2014, p.013114.

Lee, J. and Bartelt-Hunt, S. L. and Li, Y. and Morton, M. "Effect of 17beta-estradiol on stability and mobility of TiO2 rutile nanoparticles" Sci Total Environ, v.511, 2015, p.195-202.

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Xie, M-Y and Schubert, M and Lu, Jun and Persson, PO Å and Stanishev, Vallery and Hsiao, Ching-Lien and Chen, LC and Schaff, WJ and Darakchieva, Vanya "Assessing structural, free-charge carrier, and phonon properties of mixed-phase epitaxial films: The case of InN" Physical Review B, v.90, 2014, p.195306.

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Phatak, Charudatta and Liu, Yuzi and Gulsoy, Emine Begum and Schmidt, Daniel and Franke-Schubert, Eva and Petford-Long, Amanda "Visualization of the magnetic structure of sculpted three-dimensional cobalt nanospirals" Nano letters, v.14, 2014, p.759-764.

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Siotto, Fenja and Martin, Corinna and Rauh, Oliver and Van Etten, James L and Schroeder, Indra and Moroni, Anna and Thiel, Gerhard "Viruses infecting marine picoplancton encode functional potassium ion channels" Virology, v.466, 2014, p.103-111.

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M. Schubert, P. Kuehne, V. Darakchieva, and T. Hofmann "The optical Hall effect - Model description" J. Opt. Soc. Am. A, v., 2016, p.. doi:DOI: 10.1364/JOSAA.33.001553 

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T. Hofmann, A. Boosalis, P. Kühne, C. M. Herzinger, J.A. Woollam, D.K. Gaskill, J.L. Tedesco, and M. Schubert "Hole-channel conductivity in epitaxial graphene determined by terahertz optical-Hall effect and midinfrared ellipsometry" Appl. Phys. Letters, v.98, 2011, p..

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Schöche, S., P. Kühne, T. Hofmann, M. Schubert, D. Nilsson, A. Kakanakova-Georgieva, E. Janzén, and V. Darakchieva "Electron effective mass in Al0.72Ga0.28N alloys determined by mid-infrared optical Hall effect" Appl. Phys. Lett., v.103, 2013, p.212107.

P. Wilson, A. Zobel, A. Zaitouna, A. Lipatov, E. Schubert, T. Hofmann, M. Schubert, R. Lai, and A. Sinitskii "Solution-Stable Anisotropic Carbon Nanotube/Graphene Hybrids Based on Slanted Columnar Thin Films for Chemical Sensing" RSC Advances, v., 2016, p.. doi:10.1039/C6RA09252G 

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Kasputis, T. and Pieper, A. and Schubert, M. and Pannier, A. K. "Dynamic analysis of DNA nanoparticle immobilization to model biomaterial substrates using combinatorial spectroscopic ellipsometry and quartz crystal microbalance with dissipation" Thin Solid Films, v.571, 2014, p.637-643.

Xiong, Wei and Yun Shen Zhou, Li Jia Jiang, Amitabha Sarkar, Masoud Mahjouri-Samani, Zhi Qiang Xie, Yang Gao, Natale Joseph Ianno, Lan Jiang, Yong Feng Lu "Single-Step Formation of Graphene on Dielectric Surfaces" Advanced Materials, v.25, 2013, p.630-634.

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Jiang, W., J. N. Rosenberg, A. D. Wauchope., J. M. Tremblay, C. B. Shoemaker, D. P. Weeks, G. A. Oyler "Generation of a phage display library of single-domain camelid VHH antibodies directed against Chlamydomonas reinhardtii antigens and characterization of VHHs binding cell surface antigens" Plant Journal, v.76, 2013, p.709.

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K. B. Rodenhausen, T. Kasputis, A. K. Pannier, J. Y. Gerasimov, R. Y. Lai, M. Solinsky, T. E. Tiwald, H. Wang, A. Sarkar, T. Hofmann, N. Ianno, and M. Schubert "Combined Optical and Acoustical Method for Determination of Thickness and Porosity of Transparent Organic Layers Below the Ultra-thin Film Limit" Vir. J. Biol. Phys. Res., v.24, 2011, p.20.

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Lee, Jeong Soon and Lipatov, Alexey and Ha, Ligyeom and Shekhirev, Mikhail and Andalib, Mohammad Nahid and Sinitskii, Alexander and Lim, Jung Yul "Graphene substrate for inducing neurite outgrowth" Biochemical and biophysical research communications, v.460, 2015, p.267-273.

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E. Montgomery, C. Krahmer, K. Streubel, T. Hofmann, E. Schubert, and M. Schubert "Temperature dependent model dielectric function of highly disordered Ga0.52In0.48P" Thin Solid Films, v.2859, 2011, p..

Li?Beisson, Yonghua and Beisson, Fred and Riekhof, Wayne "Metabolism of acyl?lipids in Chlamydomonas reinhardtii" The Plant Journal, v.82, 2015, p.504-522.

Li, T., Huang, S., Zhao, X., Wright, D., Carpenter, S., Spalding, M.H., Weeks, D.P., and Yang, B. "Modularly-assembled designer TAL effector nucleases for targeted gene knockout and gene replacement in eukaryotes." Nucleic Acids Research, v.39, 2011, p.6315.

Kühne, P and Herzinger, CM and Schubert, M and Woollam, JA and Hofmann, T "An integrated mid-infrared, far-infrared and terahertz optical Hall effect instrument" arXiv preprint arXiv:1401.5372, v., 2014, p..

Krasnoslobodtsev, A. V., Peng, J., Asiago, J. M., Hindupur, J., Rochet, J. C., and Lyubchenko, Y. L. "Effect of spermidine on misfolding and interactions of alpha-synuclein" PLoS One, v.7, 2012, p.e38099.

N. Armakavicius, J.-T. Chen, T. Hofmann, S. Knight, P. Kühne, D. Nilsson, U. Forsberg, E. Janzen, and V. Darakchieva "Properties of two-dimensional electron gas in AlGaN/GaN HEMT structures determined by cavity-enhanced THz optical Hall effect" phys. stat. sol. 13, 369 (2016)., v., 2016, p..

Okuom, Macduff O and Burks, Raychelle and Naylor, Crysta and Holmes, Andrea E "Applied Circular Dichroism: A Facile Spectroscopic Tool for Configurational Assignment and Determination of Enantiopurity" Journal of analytical methods in chemistry, v.2015, 2015, p..

P.M. Wilson, A. Zobel, T. Hofmann, and A. Sinitskii "Multilayer Graphitic Coatings for Thermal Stabilization of Metallic Nanostructures" ACS Appl. Mater. Interfaces 7, 2987 (2015)., v., 2015, p..

Tong, Z., Mikheikin, A., Krasnoslobodtsev, A., Lv, Z. & Lyubchenko, Y. L. "Novel polymer linkers for single molecule AFM force spectroscopy" Methods, v.60, 2013, p.161-168.

Wysocki BJ, Martin TM2, Wysocki TA, and Pannier AK "Modeling nonviral gene delivery as a macro-to-nano communication system" Nano Communication Networks, v.4, 2013, p..

Thiel, Gerhard and Greiner, Timo and Dunigan, David D and Moroni, Anna and Van Etten, James L "Large dsDNA chloroviruses encode diverse membrane transport proteins" Virology, v.479, 2015, p.38-45.

Charlop-Powers, Z., J. Jakoncic, J. Gurnon, J.L. Van Etten, and M.M. Zhou "Paramecium bursaria chlorella virus 1 encodes a polyamine acetyltransferase" Journal of Biological Chemistry, v.287, 2012, p.9547.

Jiang, W.Z., J. Adamec and D. P. Weeks "A small-scale, inexpensive method for detecting formaldehyde or methanol in biochemical reactions containing interfering substances" Analytical Biochemistry, v.442, 2013, p.146.

Romani, G., Piotrowski, A., Hillmer, S., Gazzarrini, S., Gurnon, J.R., Van Etten, J.L., Moroni, A., Thiel, Hertel, B. "Viral encode potassium ion channel is a structural protein in the chlorovirus PBCV-1 virion" J. Gen. Virol., v.94, 2013, p.2549.

Kong, L., Rahman, T., Enders, A. Dowben, P. "Molecular adsorption on graphene" J. Phys: Condens. Matter., v., 2013, p..

K. B. Rodenhausen, T. Kasputis, A. K. Pannier, J. Y. Gerasimov, R. Y. Lai, M. Solinsky, T. E. Tiwald, H. Wang, A. Sarkar, T. Hofmann, N. Ianno, and M. Schubert "Combined Optical and Acoustical Method for Determination of Thickness and Porosity of Transparent Organic Layers Below the Ultra-thin Film Limit" Vir. J. Nan. Sci. & Tech., v.23, 2011, p.5.

Lyubchenko, Y. L. "Nanoscale nucleosome dynamics assessed with time-lapse AFM" Biophys Rev., v., 2013, p..

Bouhafs, C. and Darakchieva, V. and Persson, I. L. and Tiberj, A. and Persson, P. O. A. and Paillet, M. and Zahab, A. A. and Landois, P. and Juillaguet, S. and Schoche, S. and Schubert, M. and Yakimova, R. "Structural properties and dielectric function of graphene grown by high-temperature sublimation on 4H-SiC(000-1)" Journal of Applied Physics, v.117, 2015, p.9.

Lyon, M; Groathouse, J.; Beaber, J.; Turner, L; Rouhier, K.; Wilson, M.; Symonsbergen, D.; Sikich, S.; Holmes, A., "DETECHIP 1.2®: An improved molecular sensing array" J. Forensic Research, v.2, 2011, p.126. doi:10.4172/2157-7145.1000126. 

P.Kuhne, T. Hofmann, C.M. Herzinger, and M. Schubert "Terahertz frequency optical-Hall effect in multiple valley band materials" Thin Solid Films, v.519, 2011, p.2613.

Lv, Zhengjian and Krasnoslobodtsev, Alexey V and Zhang, Yuliang and Ysselstein, Daniel and Rochet, Jean-Christophe and Blanchard, Scott C and Lyubchenko, Yuri L "Direct Detection of ?-Synuclein Dimerization Dynamics: Single-Molecule Fluorescence Analysis" Biophysical journal, v.108, 2015, p.2038-2047.

Okuom, Macduff O and Holmes, Andrea E "Developing a Color-Based Molecular Sensing Device: DETECHIP®" Sensors & Transducers (1726-5479), v.183, 2014, p..

Ramm, Crystal and Wachholtz, Michael and Amundsen, Keenan and Donze, Teresa and Heng-Moss, Tiffany and Twigg, Paul and Palmer, Nathan A and Sarath, Gautam and Baxendale, Fred "Transcriptional Profiling of Resistant and Susceptible Buffalograsses in Response to Blissus occiduus (Hemiptera: Blissidae) Feeding" Journal of Economic Entomology, v., 2015, p.tov067.

Q. Cui, J. He, M. Z. Bellus, M. Mirzokarimov, T. Hofmann, H.-Y. Chiu, M. Antonik, D. He, Y. Wang, and H. Zhao "Transient Absorption Measurements on Anisotropic Monolayer ReS2" Small 41, 5565 (2015)., v., 2015, p..

Martin, T. M. and Wysocki, B. J. and Wysocki, T. A. and Pannier, A. K. "Identifying Intracellular pDNA Losses From a Model of Nonviral Gene Delivery" NanoBioscience, IEEE Transactions on, v.14, 2015, p.455-464.

De Castro, C., Molinaro, A., Piacente, F., Gurnon, J.R., Sturiale, L., Palmigiano, A., Lanzetta, R., Parrilli, M., Garosso, D., Tonetti, M., Van Etten, J.L. "Structure of The N-linked oligosaccharides attached to virus PBCV-1 major capsid protein: an unusual class of complex N-glycans" Proc. Natl. Acad. Sci. USA, v.110, 2013, p.13956.

Wemhoff, R., A. Teten, & P. Twigg "Peroxide effects lipid accumulation in Chlamydomonas reinhardtii" Plant Biology; Annual meeting of the American Society of Plant Biologists, v., 2015, p..

Holmes, A., Jung Kyu Choi, Jacob Francis, Alessandro D'Urso, Milan Balaz "Sulfonated Ni(II)porphyrin improves the detection of Z-DNA in condensed and non-condensed BZB DNA sequences." Journal of Inorganic Biochemistry, v.110, 2012, p.18.

Korshoj, Lee E and Zaitouna, Anita J and Lai, Rebecca Y "Methylene Blue-Mediated Electrocatalytic Detection of Hexavalent Chromium" Analytical chemistry, v.87, 2015, p.2560-2564.

Salamifar, S. E.; Lai, R. Y. "Fabrication of Electrochemical DNA Sensors on Gold-modified Recessed Platinum Nanoelectrodes" Anal. Chem., v.86, 2014, p.2849.

Dowben, P.A., Kunkel, D.A., Enders, A. Rosa, L. G., Routaboul, L., Doudin, B., and Braunstein, Pierre "The dipole mediated surface chemistry of the p-benzoqunonemonoimine zwitterions" ACS Topics in Catalysis, v., 2013, p.. doi:10.1007/s11244-013-0075-5 

Darakchieva, V., A. Boosalis, A. A. Zakharov, T. Hofmann, M. Schubert, T. E. Tiwald, T. Iakimov, R. Vasiliauskas, and R. Yakimova "Large-area microfocal spectroscopic ellipsometry mapping of thickness and electronic properties of epitaxial graphene on Si- and C-face of 3C-SiC (111)" App. Phys. Lett., v.102, 2013, p.213116.

Guerreiro, G. V., Zaitouna, A. J., Lai, R. Y. "Characterization of an Electrochemical Mercury Sensor Using Alternating Current, Cyclic, Square Wave and Differential Pulse Voltammetry" Analytica Chimica Acta, v.810, 2014, p.79.

Jiang, W., H. Zhou, H. Bi, M. Fromm, B. Yang, D. P. Weeks "Demonstration of CRISPR/Cas9/sgRNA-mediated targeted gene modification in Arabidopsis, tobacco, sorghum and rice" Nucleic Acids Research, v.41, 2013, p.e188.

T. Kasputis, A. Pieper, K. B. Rodenhausen, D. Schmidt, D. Sekora, C. Rice, E. Schubert, M. Schubert, and A. K. Pannier "Use of precisely sculptured thin film (STF) substrates with generalized ellipsometry to determine spatial distribution of adsorbed fibronectin to nanostructured columnar topographies and effect on cell adhesion" Acta biomaterialia, v., 2015, p.. doi:10.1016/j.actbio.2015.02.016 

Vo, T. H. and Shekhirev, M. and Kunkel, D. A. and Morton, M. D. and Berglund, E. and Kong, L. M. and Wilson, P. M. and Dowben, P. A. and Enders, A. and Sinitskii, A. "Large-scale solution synthesis of narrow graphene nanoribbons" Nature Communications, v.5, 2014, p..

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Kunkel, D.A, J. Hooper, S. Simpson, G.A. Rojas, S. Ducharme, T. Usher, E. Zurek, and A. Enders ""Proton transfer in surface-stabilized chiral and polar motifs of croconic acid"," Phys. Rev. B (rapid communciation), v.87, 2013, p.041402(R).

Kasputis, T. and Pieper, A. and Rodenhausen, K. B. and Schmidt, D. and Sekora, D. and Rice, C. and Schubert, E. and Schubert, M. and Pannier, A. K. "Use of precisely sculptured thin film (STF) substrates with generalized ellipsometry to determine spatial distribution of adsorbed fibronectin to nanostructured columnar topographies and effect on cell adhesion" Acta Biomater, v.18, 2015, p.88-99.

Bruggeman, Andrew J and Kuehler, Daniel and Weeks, Donald P "Evaluation of three herbicide resistance genes for use in genetic transformations and for potential crop protection in algae production" Plant biotechnology journal, v.12, 2014, p.894-902.

W. Xiong, Y. S. Zhou, X. N. He, Y. Gao, M. Mahjouri-Samani, L. Jiang, T. Baldacchini and Y. F. Lu "Simultaneous additive and subtractive three-dimensional nanofabrication using integrated two-photon polymerization and multiphoton ablation." Light Science Applications, v.1, 2012, p..

Li, Maoyin and Markham, Jonathan E and Wang, Xuemin "Overexpression of patatin-related phospholipase AIII? altered the content and composition of sphingolipids in Arabidopsis" Frontiers in plant science, v.5, 2014, p..

Wilson, P. M.; Zobel, A.; Zaitouna, A. J.; Lipatov, A.; Schubert, E.; Hofmann, T.; Schubert, M.; Lai, R.; Sinitskii, A., "Solution-stable anisotropic carbon nanotube/graphene hybrids based on slanted columnar thin films for chemical sensing" RSC Adv., 2, v., 2016, p..

Lu, H and Lipatov, A and Ryu, S and Kim, DJ and Lee, H and Zhuravlev, MY and Eom, CB and Tsymbal, EY and Sinitskii, A and Gruverman, A "Ferroelectric tunnel junctions with graphene electrodes" Nature communications, v.5, 2014, p..

Phan, H.T.M.2; Bartelt-Hunt, S.L., Rodenhausen, K.B., Schubert, M. and Bartz, J.C. "Investigation of bovine serum albumin (BSA) attachment onto self-assembled monolayers (SAMs) using combinatorial Quartz Crystal Microbalance with Dissipation (QCM-D) and Spectroscopic Ellipsometry (SE)" PLoS One, v., 2015, p.. doi:10.1371/journal.pone.0141282 

Okuom, M., M. Wilson, J. Groathouse, J. Lee, D. Symonsbergen, C. Gustafson, M. Trauernicht, H. Barcena, C. Reicks, S. Sikich, R. Burks, A. Holmes "Synthesis of a Fluorophore with Improved Optical Brightness" International Journal of Organic Chemistry, v.3, 2013, p.256.

A. Boosalis, T. Hofmann, J. Sik, and M. Schubert "Free-charge carrier profiles of iso- and aniso-type Si homojunctions determined by terahertz and mid-infrared ellipsometry" Thin Solid Films, v.519, 2011, p.2604.

Palmer, N. A. and Saathoff, A. J. and Tobias, C. M. and Twigg, P. and Xia, Y. N. and Vogel, K. P. and Madhavan, S. and Sattler, S. E. and Sarath, G. "Contrasting Metabolism in Perenniating Structures of Upland and Lowland Switchgrass Plants Late in the Growing Season" Plos One, v.9, 2014, p..

P.M. Wilson, A. Lipatov, D. Schmidt, E. Schubert, M.Schubert, A. Sinitskii, and T. Hofmann "Structural and optical properties of cobalt slanted nanopillars conformally coated with few-layer graphene" Appl. Phys. Lett. 106, 231901 (2015), v., 2015, p..

Lyubchenko, Y. L. "Nanoscale nucleosome dynamics assessed with time-lapse AFM" BIophysical Reviews, v., 2013, p..

Cerutti H., Ma X., Msanne J. and Repas T. "RNA-Mediated Silencing in Algae: Biological Roles and Tools for the Analysis of Gene Function." Eukaryotic Cell, v.10, 2011, p.1164.

Boosalis, A., Elmquist, R., Real, M., Nguyen, N., Schubert, M., and Hofmann, T. "A Model Dielectric Function for Graphene from the Infrared to the Ultraviolet" Mat. Res. Soc. Symp. Proc, v.1505, 2013, p.12-15. doi:10.1557/opl.2013.525 

Yu, Z. and Lai, R.Y. "A Reagentless and Reusable Electrochemical DNA Sensor Based on Target Hybridization-induced Stem-loop Probe Formation" Chem. Commun., v.48, 2012, p.10523.

Scully, E., T. Gries, G. Sarath, N. Palmer, L. Baird, M. Serapiglia, B. Dien, A. Boateng, G. Zhenxiang, D. Funnell-Harris, P. Twigg, T. Clemente, & S. Sattler. "Overexpression of SbMyb60 impacts phenylpropanoid biosynthesis and alters secondary cell wall composition in Sorghum bicolor" The Plant J. Vol. 85, p. 378-395., v.85, 2016, p.378.

David S. Hage, E.D.Dodds, L. Du and R. Powers, "Research in bioanalysis and separations at the University of Nebraska-Lincoln" Bioanalysis, v.3:10, 2011, p..

Luttgeharm KD, Chen M, Mehra A, Cahoon RE, Markham JE, Cahoon EB "Overexpression of Arabidopsis Ceramide Synthases Differentially Affects Growth, Sphingolipid Metabolism, Programmed Cell Death, and Mycotoxin Resistance" Plant Physiol., v., 2015, p.1108.

Briley, Chad and Schmidt, Daniel and Hofmann, Tino and Schubert, Eva and Schubert, Mathias "Anisotropic magneto-optical hysteresis of permalloy slanted columnar thin films determined by vector magneto-optical generalized ellipsometry" Applied Physics Letters, v.106, 2015, p.133104.

David S. Hage, Jeanethe A. Anguizola, Cong Bi, Rong Li, Ryan Matsuda, Efthimia Papastavros, Erika Pfaunmiller, John Vargas and Xiwei Zheng "Pharmaceutical and Biomedical Applications of Affinity Chromatography: Recent Trends and Developments" J. Pharm. Biomed. Anal., v., 2012, p..

T. Hofmann, C.M. Herzinger, J.L. Tedesco, D.K. Gaskill, J.A. Woollam, and M. Schubert "Terahertz ellipsometry and terahertz optical-Hall effect" Thin Solid Films, v.519, 2011, p..

S. Kment, Z. Hubicka, J. Krysa, D. Sekora, M. Zlamal, J. Olejnicek, M. Cada, P. Ksirova, Z. Remes, P. Schmulki, E. Schubert, and R. Zboril "On the improvement of PEC activity of hematite thin films deposited by high power pulsed magnetron sputter method" Appl. Catal., B, v., 2015, p.. doi:http://dx.doi.org/10.1016/j.apcatb.2014.10.015 

Gao, Han and Wright, David A and Li, Ting and Wang, Yingjun and Horken, Kempton and Weeks, Donald P and Yang, Bing and Spalding, Martin H "TALE activation of endogenous genes in Chlamydomonas reinhardtii" Algal Research, v.5, 2014, p.52-60.

Kang, Ming and Duncan, Garry A and Kuszynski, Charles and Oyler, George and Zheng, Jiayin and Becker, Donald F and Van Etten, James L "Chlorovirus PBCV-1 encodes an active copper-zinc superoxide dismutase" Journal of virology, v.88, 2014, p.12541-125.

Palmer, Nathan A and Saathoff, Aaron J and Waters, Brian M and Donze, Teresa and Heng-Moss, Tiffany M and Twigg, Paul and Tobias, Christian M and Sarath, Gautam "Global changes in mineral transporters in tetraploid switchgrasses (Panicum virgatum L.)" Frontiers in plant science, v.4, 2013, p..

D.A. Kunkel, S. Simpson, J. Nitz, G. Rojas, L. Rotaboul, P. Braunstein, B. Doudin, E. Zurek, P.A. Dowben, A. Enders "Dipole driven bonding schemes of quinonoid zwitterions on surfaces" Chem Commun., v., 2012, p.. doi:10.1039/c2cc32462h 

Lee, S.W., Lee, E.H., Thiel, G., Van Etten, J.L. Saraf, R.F "Noninvasive measurement of a single chlorovirus infection of a microalgal cell" ACS Nano, v.10, 2016, p.5123.

Riekhof, Wayne R and Naik, Surabhi and Bertrand, Helmut and Benning, Christoph and Voelker, Dennis R "Phosphate starvation in fungi induces the replacement of phosphatidylcholine with the phosphorus-free betaine lipid diacylglyceryl-N, N, N-trimethylhomoserine" Eukaryotic cell, v.13, 2014, p.749-757.

Greiner, T., Ramos, J., Alvarez, M., Gurnon, J.R., Kang, M. Van Etten, J.L., Moroni, A., and Thiel, G. "A functional HAK/KUP/KT-like potassium transporter encoded by chlorella viruses" Plant Journal, v.68, 2011, p.977.

Donze, Teresa and Qu, Feng and Twigg, Paul and Morris, T Jack "Turnip crinkle virus coat protein inhibits the basal immune response to virus invasion in Arabidopsis by binding to the NAC transcription factor TIP" Virology, v.449, 2014, p.207-214.

Yu, Z.; Zaitouna, A. J.; Lai, R. Y. "Effect of Redox Label Tether Length and Flexibility on Sensor Performance of Displacement-based Electrochemical Nucleic Acid Sensors" Analytica Chimica Acta, v.812, 2014, p.176.

Yang, W. and Lai, R.Y. "A Dual-signalling Electrochemical DNA Sensor Based on Target Hybridization-induced Change in DNA Probe Flexibility" Chem. Commun., v.48, 2012, p.8703-8705.

Lyon, Marcus, Mark V. Wilson, Kerry A. Rouhier, David J. Symonsbergen, Kiran Bastola, Ishwor Thapa, Andrea E. Holmes, Sharmin M. Sikich, and Abby Jackson "Digital Image Analysis for Code Analysis" Signal and Image Processing: An international Journal, v.3, 2012, p.51-63.

Vo, Timothy H and Shekhirev, Mikhail and Kunkel, Donna A and Orange, François and Guinel, Maxime J-F and Enders, Axel and Sinitskii, Alexander "Bottom-up solution synthesis of narrow nitrogen-doped graphene nanoribbons" Chemical Communications, v.50, 2014, p.4172-4174.

Guo, F.W., Fink, T., Han, M., Koester, L., Turner, J., Huang, J.S. "High-sensitivity, high-frequency extrinsic Fabry-Perot interferometric fiber-tip sensor based a thin silver diaphragm" Optics Letters, v.37, 2012, p.1506.

Han, M., Liu, T.Q., Hu, L.L., and Zhang, Q. "Intensity-demodulated fiber-ring laser sensor system for acoustic emission detection" Optics Express, v.21, 2013, p.29269.

Boosalis, T. Hofmann, V. Darakchieva, R. Yakimova, and M. Schubert "Visible to Vacuum Ultraviolet Dielectric Functions of Epitaxial Graphene on 3C and 4H SiC Polytypes Determined by Spectroscopic Ellipsometry" Appl. Phys. Lett., v., 2012, p..

K.B. Rodenhausen, M. Guericke, A. Sarkar, T. Hofmann, N. Ianno, M. Schubert, T.E. Tiwald, M. Solinsky, and M. Wagner "Micelle-assisted bilayer formation of cetyltrimethlyammonium bromide thin films studied with combinatorial spectroscopic ellipsometry and quartz crystal microbalance techniques" Thin Solid Films, v.519, 2011, p.2821.

De Castro, C., Speciale, I., Duncan, G., Dunigan, D.D., Agarkova, I., Lanzetta, R., Sturiale, L., Palmigiano, A., Garozzo, D., Molinaro, A., Tonetti, M., Van Etten, J.L. "Chloroviruses N-linked glycans share a new type of conserved core architecture unprecedented in any form of life." Angewandte Chemie, v.55, 2016, p.654.

Lyubchenko, Y. L. and Gall, A. A. and Shlyakhtenko, L. S. "Visualization of DNA and Protein-DNA Complexes with Atomic Force Microscopy" Electron Microscopy: Methods and Protocols, 3rd Edition, v.1117, 2014, p.367-384.

Rodenhausen, K. B. and Davis, R. S. and Sekora, D. and Liang, D. and Mock, A. and Neupane, R. and Schmidt, D. and Hofmann, T. and Schubert, E. and Schubert, M. "The retention of liquid by columnar nanostructured surfaces during quartz crystal microbalance measurements and the effects of adsorption thereon" J Colloid Interface Sci, v.455, 2015, p.226-235.

Willicott, C., K. Musil, A. Teten, & P. Twigg "Tracking transcription factor expression levels under nitrogen depletion in Chlorella sorokiniana." Plant Biology 2015, Annual meeting of the American Society of Plant Biologists, v., 2015, p..

Lyubchenko, Y. L. "Nanoimaging methods for biomedicine" Methods, v.60, 2013, p.111-112.

Moteki, Shin A.; Toyama, Kazuya; Liu, Zeyu; Ma, Jing; Holmes, Andrea E.; Takacs, James M. "Two-stage optimization of a supramolecular catalyst for catalytic asymmetric hydroboration." Chemical Communications, v.48, 2012, p.263.

Pfaunmiller, Erika L., Mahli Hartmann, Courtney M. Dupper, Sony Soman and David S. Hage "Optimization of Human Serum Albumin Monoliths for Chiral Separations and High-Performance Affinity Chromatography" J. Chromatogr. A, v.1269, 2012, p.198-207.

A. Mock, R. Korlacki, C. Briley, D. Sekora, T. Hofmann, P. Wilson, A. Sinitskii, E. Schubert, and M. Schubert "Anisotropy, band-to-band transitions, phonon modes, and oxidation properties of cobalt-oxide core-shell slanted columnar thin films" Appl. Phys. Lett. 108, 051905 (2016)., v., 2016, p..

Schmidt, D., Briley, C., Schubert, E., and Schubert, M. "Vector magneto-optical generalized ellipsometry of sculptured thin films" , Appl. Phys. Lett., v.102, 2013, p.123109.

Rowe, J.M., Jeanniard, A., Gurnon, J.R., Xia, Y., Dunigan, D.D., Van Etten, J.L., Blanc, G. "Global analysis of Chlorella variabilis NC64A mRNA profiles during the early phase of Paramecium bursaria chlorella virus-1 infection" PLoS ONE, v.9, 2014, p.E90988.

Yamasaki T., Voshall A., Kim E.-J., Moriyama E., Cerutti H. and Obama T. "Complementarity to a miRNA seed region is sufficient to induce moderate repression of a target transcript in the unicellular green alga Chlamydomonas reinhardtii." Plant Journal, v.76, 2013, p.1045.

Rodenhausen, K., and T. Kasputis, A. Pannier, J. Gerasimov, R. Lai, T. Tiwald, H. Wang, A. Sarkar, T. Hofmann, N. Ianno, and M. Schubert, "Combined optical and acoustical method for determination of thickness and porosity of transparent organic layers below the ultra-thin film limit" Rev. Sci. Instrum., v.82, 2011, p.103111.

Lofti Z Z, H. R.; Lai, R. Y "Comparison of Nanostructured Silver-modified Silver and Carbon Ultramicroelectrodes for Electrochemical Detection of Nitrate" Anal. Chim. Acta, 2015, 892, 153-159., v., 2015, p..

Li, Ting; Huang, Sheng; Zhao, Xuefeng; Wright, David; Carpenter, Susan; Spalding, Martin; Weeks, Donald and Yang, Bing. "Modularly-assembled designer TAL effector nucleases for targeted gene knockout and gene replacement in eukaryotes" Nucleic Acids Research, v., 2011, p..

Pfaunmiller, Erika L and Anguizola, Jeanethe A and Milanuk, Mitchell L and Papastavros, Efthimia and Carter, NaTasha and Matsuda, Ryan and Zheng, Xiwei and Hage, David S "Development of microcolumn-based one-site immunometric assays for protein biomarkers" Journal of Chromatography A, v.1366, 2014, p.92-100.

Blanc, G., Mozar, M., Agarkova, I.V., Gurnon, J.R., Yanai-Balser, G., Rowe, J.M., Xia, Y., Riethoven, J.J., Dunigan, D.D., Van Etten, J.L. "Deep RNA sequencing reveals hidden features and dynamics of early gene ranscription in Paramecium bursaraia chlorella virus 1" PLoS ONE, v., 2014, p.E90989.

Lyubchenko, Yuri L "Nanoscale nucleosome dynamics assessed with time-lapse AFM" Biophysical reviews, v.6, 2014, p.181-190.

E. Bittrich, K.B. Rodenhausen, K. Eichhorn, T. Hofmann, M. Schubert, M. Stamm, and P. Uhlmann "Protein adsorption on and swelling of polyelectrolyte brushes: a simultaneous ellipsometry-quartz crystal microbalance study" Biointerphases, v.5, 2010, p..

Wu, Y. and Lai, R.Y. "Development of a "Signal-on" Electrochemical DNA Sensor with an Oligo-thymine Spacer for Point Mutation Detection" Chem. Commun., v.49, 2013, p.3422-3424.

Shlyakhtenko, L. S., Lushnikov, A. Y., Miyagi, A., Li, M., Harris, R. S. & Lyubchenko, Y. L. "Atomic force microscopy studies of APOBEC3G oligomerization and dynamics" Journal of Structural Biology, v.184, 2013, p.217.

Lipatov, Alexey and Varezhnikov, Alexey and Augustin, Martin and Bruns, Michael and Sommer, Martin and Sysoev, Victor and Kolmakov, Andrei and Sinitskii, Alexander "Intrinsic device-to-device variation in graphene field-effect transistors on a Si/SiO2 substrate as a platform for discriminative gas sensing" Applied Physics Letters, v.104, 2014, p.013114.

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Project Outcomes Report

Disclaimer

This Project Outcomes Report for the General Public is displayed verbatim as submitted by the Principal Investigator (PI) for this award. Any opinions, findings, and conclusions or recommendations expressed in this Report are those of the PI and do not necessarily reflect the views of the National Science Foundation; NSF has not approved or endorsed its content.

The NSF EPSCoR Research Infrastructure Improvement (RII) Track-1 project, “Nanohybrid Materials & Algal Biology,” funded the establishment of two research centers with 34 faculty members from six Nebraska institutions.

The Center for Nanohybrid Functional Materials (CNFM) targeted discovery and exploitation of new sensing and separation principles, based on CNFM’s controlled incorporation of chemical and biochemical recognition elements onto highly ordered 3-D nanostructures. Birefringence, a measure of how light interacts with these ordered surfaces, is highly sensitive to the presence of nearby molecules or materials, making the new surfaces very useful for sensing. Several examples of sensing technology have grown from CNFM research, including:

•     Optical Anisotropy Contrast Microscopy: a new class of instrumentation that achieved a record sensitivity of 150 trillionths (0.00000000000000015) of a gram in its observations; and

•     DETECHIP, a sensing/detection device for potential use in healthcare, military security and consumer safety. This technology benefits from CNFM expertise in Imaging Chromatography, where the functionalized nanoscaffolds enable simultaneous separation and birefringence-based imaging of samples.

The Nebraska Center for Algal Biology and Biotechnology (NCABB) focused on algal lipid biosynthesis and metabolism, and has contributed to greater understanding of molecular, biochemical, and genetic processes in algal systems. Algae can provide large quantities of lipid-based biofuels on land unusable for production of food crops, but such development has been hindered by limited knowledge of the genetic and biochemical factors that dictate algae’s growth and its ability to accumulate lipids (fats that produce biofuel materials). NCABB developed several molecular tools for microalgae research, including techniques to activate specific genes, herbicide resistance, and selectable markers which are potentially useful for purer algal cultures. These and other NCABB-developed tools help improve gene expression and cell studies in microalgae.

NSF granted an additional year (beyond the original five-year term) to the project for further advances by the nano and algal research teams. At its conclusion, the project overall generated more than 300 journal articles or other peer-reviewed publications and a total of $63.8 million in additional funding through 115 successful grant applications. The project supported training for 81 undergraduates, 33 graduate students, and 19 postdocs. Also, four new faculty members have been hired and retained at the University of Nebraska-Lincoln with this project’s support, and five members of the project earned NSF CAREER Awards during the project term (Drs. Lai, E. Schubert, Pannier, Bartelt-Hunt, and Sinitskii). In addition, this project has established robust STEM education and outreach programs via Nebraska EPSCoR for K-16 students through science camps, research activities, secondary classroom mobile labs and various public outreach events. Throughout the course of the project these efforts have reached more than 11,000 participants. 


Last Modified: 12/09/2016
Modified by: F. Fred Choobineh

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