Award Abstract # 1830011
Collaborative Research: Teasing apart coexisting cyanobacteria in the Laurentian Great Lakes

NSF Org: OCE
Division Of Ocean Sciences
Recipient: UNIVERSITY OF CHICAGO
Initial Amendment Date: August 20, 2018
Latest Amendment Date: July 29, 2022
Award Number: 1830011
Award Instrument: Standard Grant
Program Manager: Daniel J. Thornhill
dthornhi@nsf.gov
 (703)292-8143
OCE
 Division Of Ocean Sciences
GEO
 Directorate For Geosciences
Start Date: September 1, 2018
End Date: August 31, 2023 (Estimated)
Total Intended Award Amount: $698,196.00
Total Awarded Amount to Date: $746,746.00
Funds Obligated to Date: FY 2018 = $698,196.00
FY 2022 = $48,550.00
History of Investigator:
  • Maureen Coleman (Principal Investigator)
    mlcoleman@uchicago.edu
  • Jacob Waldbauer (Co-Principal Investigator)
Recipient Sponsored Research Office: University of Chicago
5801 S ELLIS AVE
CHICAGO
IL  US  60637-5418
(773)702-8669
Sponsor Congressional District: 01
Primary Place of Performance: University of Chicago
5734 South Ellis Avenue
Chicago
IL  US  60637-5418
Primary Place of Performance
Congressional District:
01
Unique Entity Identifier (UEI): ZUE9HKT2CLC9
Parent UEI: ZUE9HKT2CLC9
NSF Program(s): BIOLOGICAL OCEANOGRAPHY
Primary Program Source: 01002223DB NSF RESEARCH & RELATED ACTIVIT
01001819DB NSF RESEARCH & RELATED ACTIVIT
Program Reference Code(s): 102Z, 108Z, 1097, 8811, 9117
Program Element Code(s): 165000
Award Agency Code: 4900
Fund Agency Code: 4900
Assistance Listing Number(s): 47.050

ABSTRACT

The Laurentian Great Lakes hold 20% of our planet's surface freshwater and 84% of US surface freshwater, comprising the largest freshwater ecosystem on Earth. They provide critical ecosystem services such as fisheries and recreation, and serve as the drinking water source to 40 million people. In recent decades, the Great Lakes have experienced significant environmental changes, such as nutrient pollution and invasive species, that have altered water chemistry and food web structure. In particular, the base of the food web has changed dramatically. Annual spring phytoplankton blooms have largely disappeared in Lakes Michigan and Huron, while toxic cyanobacterial blooms have increased in Lake Erie. The microorganisms that make up the base of the food web in the Great Lakes are poorly understood and play critical roles in regulating water quality and ecosystem productivity. This project characterizes single-celled cyanobacteria across the Laurentian Great Lakes to understand their genetic diversity and ecology. The investigators are working with local high schools on Chicago's south side to develop teaching modules about the role of microorganisms in the health of the Great Lakes. Local high school teachers will be engaged to design lessons about aquatic microbial ecology, with the goal of increasing Great Lakes literacy and STEM participation in Chicago's impoverished and diverse south side communities.

Picocyanobacteria contribute up to 50% of primary production in some portions of the Laurentian Great Lakes. However, little is known about their population structure and dynamics, or about factors shaping their abundance and activity. Understanding controls on picocyanobacterial diversity and function is crucial for developing predictive biogeochemical models for the Great Lakes in the face of rapid environmental change. Multiple phylogenetic groups of coexisting picocyanobacteria in the Great Lakes have recently been identified, and this project characterizes their genetic, physiological, and ecological diversity. Using a combination of flow cytometry and molecular sequencing approaches, distinct populations are being quantified across lakes, depths, and seasons, and comparative genomics is being used to reveal how pathways and genes are distributed across taxa and habitats. Quantitative transcriptomics and proteomics are being used to diagnose environmental controls on gene expression and to assess the relative activity of distinct populations. Ongoing time series data and archived samples are being combined with targeted sampling aboard the R/V Blue Heron. This project advances our knowledge of the Great Lakes microbial food web by generating the first systematic picture of picocyanobacterial diversity in this ecosystem.

This award reflects NSF's statutory mission and has been deemed worthy of support through evaluation using the Foundation's intellectual merit and broader impacts review criteria.

PUBLICATIONS PRODUCED AS A RESULT OF THIS RESEARCH

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Ozersky, Ted and Bramburger, Andrew J. and Elgin, Ashley K. and Vanderploeg, Henry A. and Wang, Jia and Austin, Jay A. and Carrick, Hunter J. and Chavarie, Louise and Depew, David C. and Fisk, Aaron T. and Hampton, Stephanie E. and Hinchey, Elizabeth K. a "The Changing Face of Winter: Lessons and Questions From the Laurentian Great Lakes" Journal of Geophysical Research: Biogeosciences , v.126 , 2021 https://doi.org/10.1029/2021JG006247 Citation Details
Gale, John and Sweeney, Carey and Paver, Sara and Coleman, Maureen L. and Thompson, Anne W. "Diverse and variable community structure of picophytoplankton across the Laurentian Great Lakes" Limnology and Oceanography , v.68 , 2023 https://doi.org/10.1002/lno.12422 Citation Details
Paver, Sara F. and Newton, Ryan J. and Coleman, Maureen L. "Microbial communities of the Laurentian Great Lakes reflect connectivity and local biogeochemistry" Environmental Microbiology , v.22 , 2019 https://doi.org/10.1111/1462-2920.14862 Citation Details
Podowski, Justin C. and Paver, Sara F. and Newton, Ryan J. and Coleman, Maureen L. "Genome Streamlining, Proteorhodopsin, and Organic Nitrogen Metabolism in Freshwater Nitrifiers" mBio , v.13 , 2022 https://doi.org/10.1128/mbio.02379-21 Citation Details

PROJECT OUTCOMES REPORT

Disclaimer

This Project Outcomes Report for the General Public is displayed verbatim as submitted by the Principal Investigator (PI) for this award. Any opinions, findings, and conclusions or recommendations expressed in this Report are those of the PI and do not necessarily reflect the views of the National Science Foundation; NSF has not approved or endorsed its content.

Cyanobacteria are critical components of microbial food webs in aquatic ecosystems. This project characterized, for the first time, the genetic diversity and population dynamics of small unicellular picocyanobacteria across the Laurentian Great Lakes (Intellectual Merit). The Great Lakes are a unique and vital ecosystem providing countless socioeconomic benefits. This project documented diverse microbial communities in the Great Lakes containing hundreds of species, that exhibit predictable patterns with water depth, season, and across lakes. Microbial communities in Lake Erie were found to be distinct from communities in other lakes. Microbial community structure is predominantly driven by local environmental conditions, rather than by geographic distance. Thousands of samples were collected aboard two research vessels, the R/V Lake Guardian and the R/V Blue Heron, greatly expanding the spatial and temporal coverage of previous datasets. Focusing on specific taxonomic and functional groups, the project identified and characterized novel lineages of picocyanobacteria and nitrifying Bacteria and Archaea, both important for nutrient cycling. New methods were developed for studying microbial communities using multi-laser flow cytometry, comparative metagenomics, and metaproteomics. New datasets were produced including DNA sequences, flow cytometry, and environmental parameters. The Broader Impacts of the project include training 1 postdoctoral fellow, 4 Ph.D. students including one female URM, 5 undergraduates, 1 postbaccalaureate trainee (female URM), and 1 high school student. Results were disseminated through numerous regional, national, and international conferences, published manuscripts, and research seminars. The project enhanced public understanding of the Great Lakes and microbial communities via the South Side Science Festival in Chicago and press coverage in the Chicago Tribune, Associated Press, and WBEZ Chicago.

 


Last Modified: 01/12/2024
Modified by: Maureen L Coleman

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